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wrab12/awesome-spatial-transcriptomics

A curated list of tools, foundation models, datasets and tutorials for spatial transcriptomics and single-cell analysis, ordered the way an analysis goes.

★ 57
Stars
2 forks · 0 open issues
+3.0/wk
Growth · measured
Stars counted between two of our own snapshots roughly a week apart. The repository page gives the exact span.
21.7
Momentum / 100
see the breakdown below
32d ago
Created
last push 19d ago

Star history

2026-10-12 42 → 57 stars +15 over 24 days 2026-11-05

How this score was built

ComponentWeightEarnedWhy
Velocity553.0 +3.0/wk, log-scaled against a 750/day ceiling
Acceleration150.0 last week ran 0.69× the monthly pace
Freshness1513.6 last push 19d ago; decays to zero at 180 days
Scale155.1 57 stars, log-scaled against 150k — stops a 3-star repo topping the board
Momentum10021.7 sum of the above

Detail

Topicsawesomeawesome-listbioinformaticscomputational-biologydeep-learningfoundation-modelsgenomicsmerfishscrna-seqsingle-cellsingle-cell-rna-seqspatial-omicsspatial-transcriptomicsvisiumxenium
Matched onLearning & Roadmaps (awesome-list)
Short window+3 stars over 7 days = 0.4/day
Long window+15 stars over 24 days = 0.6/day
Lifetime average1.91 stars/day over 30 days
First seen here2026-10-12
Last read2d ago